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10584241

Run 10584241

Task 14966 (Supervised Classification) Bioresponse Uploaded 03-12-2021 by Marc Boel
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Flow

sklearn.pipeline.Pipeline(columntransformer=sklearn.compose._column_transfo rmer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,one hotencoder=sklearn.preprocessing._encoders.OneHotEncoder),gradientboostingc lassifier=sklearn.ensemble._gb.GradientBoostingClassifier)(2)Pipeline of transforms with a final estimator. Sequentially apply a list of transforms and a final estimator. Intermediate steps of the pipeline must be 'transforms', that is, they must implement `fit` and `transform` methods. The final estimator only needs to implement `fit`. The transformers in the pipeline can be cached using ``memory`` argument. The purpose of the pipeline is to assemble several steps that can be cross-validated together while setting different parameters. For this, it enables setting parameters of the various steps using their names and the parameter name separated by a `'__'`, as in the example below. A step's estimator may be replaced entirely by setting the parameter with its name to another estimator, or a transformer removed by setting it to `'passthrough'` or `None`.
sklearn.compose._column_transformer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,onehotencoder=sklearn.preprocessing._encoders.OneHotEncoder)(2)_n_jobsnull
sklearn.compose._column_transformer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,onehotencoder=sklearn.preprocessing._encoders.OneHotEncoder)(2)_remainder"drop"
sklearn.compose._column_transformer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,onehotencoder=sklearn.preprocessing._encoders.OneHotEncoder)(2)_sparse_threshold0.3
sklearn.compose._column_transformer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,onehotencoder=sklearn.preprocessing._encoders.OneHotEncoder)(2)_transformer_weightsnull
sklearn.compose._column_transformer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,onehotencoder=sklearn.preprocessing._encoders.OneHotEncoder)(2)_transformers[{"oml-python:serialized_object": "component_reference", "value": {"key": "simpleimputer", "step_name": "simpleimputer", "argument_1": {"oml-python:serialized_object": "function", "value": "openml.extensions.sklearn.cont"}}}, {"oml-python:serialized_object": "component_reference", "value": {"key": "onehotencoder", "step_name": "onehotencoder", "argument_1": {"oml-python:serialized_object": "function", "value": "openml.extensions.sklearn.cat"}}}]
sklearn.compose._column_transformer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,onehotencoder=sklearn.preprocessing._encoders.OneHotEncoder)(2)_verbosefalse
sklearn.compose._column_transformer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,onehotencoder=sklearn.preprocessing._encoders.OneHotEncoder)(2)_verbose_feature_names_outtrue
sklearn.impute._base.SimpleImputer(28)_add_indicatorfalse
sklearn.impute._base.SimpleImputer(28)_copytrue
sklearn.impute._base.SimpleImputer(28)_fill_valuenull
sklearn.impute._base.SimpleImputer(28)_missing_valuesNaN
sklearn.impute._base.SimpleImputer(28)_strategy"mean"
sklearn.impute._base.SimpleImputer(28)_verbose0
sklearn.preprocessing._encoders.OneHotEncoder(30)_categories"auto"
sklearn.preprocessing._encoders.OneHotEncoder(30)_dropnull
sklearn.preprocessing._encoders.OneHotEncoder(30)_dtype{"oml-python:serialized_object": "type", "value": "np.float64"}
sklearn.preprocessing._encoders.OneHotEncoder(30)_handle_unknown"ignore"
sklearn.preprocessing._encoders.OneHotEncoder(30)_sparsetrue
sklearn.pipeline.Pipeline(columntransformer=sklearn.compose._column_transformer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,onehotencoder=sklearn.preprocessing._encoders.OneHotEncoder),gradientboostingclassifier=sklearn.ensemble._gb.GradientBoostingClassifier)(2)_memorynull
sklearn.pipeline.Pipeline(columntransformer=sklearn.compose._column_transformer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,onehotencoder=sklearn.preprocessing._encoders.OneHotEncoder),gradientboostingclassifier=sklearn.ensemble._gb.GradientBoostingClassifier)(2)_steps[{"oml-python:serialized_object": "component_reference", "value": {"key": "columntransformer", "step_name": "columntransformer"}}, {"oml-python:serialized_object": "component_reference", "value": {"key": "gradientboostingclassifier", "step_name": "gradientboostingclassifier"}}]
sklearn.pipeline.Pipeline(columntransformer=sklearn.compose._column_transformer.ColumnTransformer(simpleimputer=sklearn.impute._base.SimpleImputer,onehotencoder=sklearn.preprocessing._encoders.OneHotEncoder),gradientboostingclassifier=sklearn.ensemble._gb.GradientBoostingClassifier)(2)_verbosefalse
sklearn.ensemble._gb.GradientBoostingClassifier(4)_ccp_alpha0.0
sklearn.ensemble._gb.GradientBoostingClassifier(4)_criterion"friedman_mse"
sklearn.ensemble._gb.GradientBoostingClassifier(4)_initnull
sklearn.ensemble._gb.GradientBoostingClassifier(4)_learning_rate0.8190768756284874
sklearn.ensemble._gb.GradientBoostingClassifier(4)_loss"deviance"
sklearn.ensemble._gb.GradientBoostingClassifier(4)_max_depth3
sklearn.ensemble._gb.GradientBoostingClassifier(4)_max_featuresnull
sklearn.ensemble._gb.GradientBoostingClassifier(4)_max_leaf_nodes1629
sklearn.ensemble._gb.GradientBoostingClassifier(4)_min_impurity_decrease0.0
sklearn.ensemble._gb.GradientBoostingClassifier(4)_min_samples_leaf172
sklearn.ensemble._gb.GradientBoostingClassifier(4)_min_samples_split2
sklearn.ensemble._gb.GradientBoostingClassifier(4)_min_weight_fraction_leaf0.0
sklearn.ensemble._gb.GradientBoostingClassifier(4)_n_estimators100
sklearn.ensemble._gb.GradientBoostingClassifier(4)_n_iter_no_change19
sklearn.ensemble._gb.GradientBoostingClassifier(4)_random_state16691
sklearn.ensemble._gb.GradientBoostingClassifier(4)_subsample1.0
sklearn.ensemble._gb.GradientBoostingClassifier(4)_tol0.0001
sklearn.ensemble._gb.GradientBoostingClassifier(4)_validation_fraction0.06279889273900642
sklearn.ensemble._gb.GradientBoostingClassifier(4)_verbose0
sklearn.ensemble._gb.GradientBoostingClassifier(4)_warm_startfalse

Result files

xml
Description

XML file describing the run, including user-defined evaluation measures.

arff
Predictions

ARFF file with instance-level predictions generated by the model.

18 Evaluation measures

Area under ROC curve
0.8432 ± 0.0245
Per class
Cross-validation details (10-fold Crossvalidation)
F measure
0.7711 ± 0.0241
Per class
Cross-validation details (10-fold Crossvalidation)
Kappa
0.5385 ± 0.049
Cross-validation details (10-fold Crossvalidation)
KB relative information score
0.4339 ± 0.0424
Cross-validation details (10-fold Crossvalidation)
Mean absolute error
0.292 ± 0.021
Cross-validation details (10-fold Crossvalidation)
Mean prior absolute error
0.4964 ± 0.0001
Cross-validation details (10-fold Crossvalidation)
Weighted recall
0.7713 ± 0.024
Cross-validation details (10-fold Crossvalidation)
Number of instances
3751
Per class
Cross-validation details (10-fold Crossvalidation)
Precision
0.771 ± 0.0244
Per class
Cross-validation details (10-fold Crossvalidation)
Predictive accuracy
0.7713 ± 0.024
Cross-validation details (10-fold Crossvalidation)
Prior entropy
0.9948 ± 0.0003
Cross-validation details (10-fold Crossvalidation)
Relative absolute error
0.5882 ± 0.0424
Cross-validation details (10-fold Crossvalidation)
Root mean prior squared error
0.4982 ± 0.0001
Cross-validation details (10-fold Crossvalidation)
Root mean squared error
0.4026 ± 0.0187
Cross-validation details (10-fold Crossvalidation)
Root relative squared error
0.8081 ± 0.0376
Cross-validation details (10-fold Crossvalidation)
Unweighted recall
0.7688 ± 0.0248
Cross-validation details (10-fold Crossvalidation)