Run
10416928

Run 10416928

Task 9957 (Supervised Classification) qsar-biodeg Uploaded 12-10-2019 by Jan van Rijn
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  • ReproducibleBenchmark weka weka_3.4.3
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Flow

weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomS earch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(wek a.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsuperv ised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize) ,weka.classifiers.trees.RandomForest))(1)Weka implementation.
weka.classifiers.meta.multisearch.RandomSearch(1)_sample-size["100.0"]
weka.classifiers.meta.multisearch.RandomSearch(1)_num-folds["3"]
weka.classifiers.meta.multisearch.RandomSearch(1)_test-set["."]
weka.classifiers.meta.multisearch.RandomSearch(1)_num-iterations["50"]
weka.classifiers.meta.multisearch.RandomSearch(1)_num-slots["1"]
weka.classifiers.meta.multisearch.RandomSearch(1)_D["false"]
weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize)(1)_F["weka.filters.unsupervised.attribute.ReplaceMissingValues","weka.filters.unsupervised.attribute.RemoveUseless","weka.filters.unsupervised.attribute.Normalize"]
weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize)(1)_output-debug-info["false"]
weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize)(1)_-do-not-check-capabilities["false"]
weka.filters.unsupervised.attribute.RemoveUseless(1)_M["99.0"]
weka.filters.unsupervised.attribute.Normalize(1)_S["1.0"]
weka.filters.unsupervised.attribute.Normalize(1)_T["0.0"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest))(1)_E["ACC"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest))(1)_class-label["1"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest))(1)_search["weka.core.setupgenerator.MathParameter -property classifier.numFeatures -min 0.1 -max 0.9 -step 0.1 -base 1.0 -expression I"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest))(1)_algorithm["weka.classifiers.meta.multisearch.RandomSearch"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest))(1)_log-file["/home/vanrijn/schedule/study14"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest))(1)_S["1"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest))(1)_W["weka.classifiers.meta.FilteredClassifier"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest))(1)_output-debug-info["false"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest))(1)_-do-not-check-capabilities["false"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest)(1)_F["weka.filters.MultiFilter"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest)(1)_doNotCheckForModifiedClassAttribute["false"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest)(1)_S["1"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest)(1)_W["weka.classifiers.trees.RandomForest"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest)(1)_output-debug-info["false"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.trees.RandomForest)(1)_-do-not-check-capabilities["false"]
weka.classifiers.trees.RandomForest(1)_P["100"]
weka.classifiers.trees.RandomForest(1)_O["false"]
weka.classifiers.trees.RandomForest(1)_store-out-of-bag-predictions["false"]
weka.classifiers.trees.RandomForest(1)_output-out-of-bag-complexity-statistics["false"]
weka.classifiers.trees.RandomForest(1)_print["false"]
weka.classifiers.trees.RandomForest(1)_attribute-importance["false"]
weka.classifiers.trees.RandomForest(1)_I["100"]
weka.classifiers.trees.RandomForest(1)_num-slots["1"]
weka.classifiers.trees.RandomForest(1)_K["0"]
weka.classifiers.trees.RandomForest(1)_M["1.0"]
weka.classifiers.trees.RandomForest(1)_V["0.001"]
weka.classifiers.trees.RandomForest(1)_S["1"]
weka.classifiers.trees.RandomForest(1)_U["false"]
weka.classifiers.trees.RandomForest(1)_B["false"]
weka.classifiers.trees.RandomForest(1)_output-debug-info["false"]
weka.classifiers.trees.RandomForest(1)_-do-not-check-capabilities["false"]

Result files

xml
Description

XML file describing the run, including user-defined evaluation measures.

arff
Predictions

ARFF file with instance-level predictions generated by the model.

arff
Trace

ARFF file with the trace of all hyperparameter settings tried during optimization, and their performance.

18 Evaluation measures

Area under ROC curve
0.9327 ± 0.0315
Per class
Cross-validation details (10-fold Crossvalidation)
F measure
0.8637 ± 0.0396
Per class
Cross-validation details (10-fold Crossvalidation)
Kappa
0.6922 ± 0.0894
Cross-validation details (10-fold Crossvalidation)
KB relative information score
0.5661 ± 0.055
Cross-validation details (10-fold Crossvalidation)
Mean absolute error
0.2024 ± 0.0219
Cross-validation details (10-fold Crossvalidation)
Mean prior absolute error
0.4472 ± 0.0012
Cross-validation details (10-fold Crossvalidation)
Number of instances
1055
Per class
Cross-validation details (10-fold Crossvalidation)
OS information
['Oracle Corporation', '1.8.0_222', 'amd64', 'Linux', '3.10.0-1062.1.1.el7.x86_64']
Precision
0.8639 ± 0.0405
Per class
Cross-validation details (10-fold Crossvalidation)
Predictive accuracy
0.8654 ± 0.039
Cross-validation details (10-fold Crossvalidation)
Prior entropy
0.9223 ± 0.0036
Cross-validation details (10-fold Crossvalidation)
Recall
0.8654 ± 0.039
Per class
Cross-validation details (10-fold Crossvalidation)
Relative absolute error
0.4526 ± 0.0485
Cross-validation details (10-fold Crossvalidation)
Root mean prior squared error
0.4728 ± 0.0013
Cross-validation details (10-fold Crossvalidation)
Root mean squared error
0.307 ± 0.0315
Cross-validation details (10-fold Crossvalidation)
Root relative squared error
0.6493 ± 0.0664
Cross-validation details (10-fold Crossvalidation)