Run
10416445

Run 10416445

Task 9957 (Supervised Classification) qsar-biodeg Uploaded 11-10-2019 by Jan van Rijn
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  • ReproducibleBenchmark weka weka_3.4.3
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Flow

weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomS earch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(wek a.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsuperv ised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize) ,weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RB FKernel,weka.classifiers.functions.Logistic)))(1)Weka implementation.
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)))(1)_E["ACC"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)))(1)_class-label["1"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)))(1)_search["weka.core.setupgenerator.MathParameter -property classifier.kernel.gamma -min -12.0 -max 12.0 -step 1.0 -base 2.0 -expression pow(BASE,I)","weka.core.setupgenerator.MathParameter -property classifier.c -min -12.0 -max 12.0 -step 1.0 -base 2.0 -expression pow(BASE,I)"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)))(1)_algorithm["weka.classifiers.meta.multisearch.RandomSearch"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)))(1)_log-file["/home/vanrijn/schedule/study14"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)))(1)_S["1"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)))(1)_W["weka.classifiers.meta.FilteredClassifier"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)))(1)_output-debug-info["false"]
weka.classifiers.meta.MultiSearch(weka.classifiers.meta.multisearch.RandomSearch,weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)))(1)_-do-not-check-capabilities["false"]
weka.classifiers.meta.multisearch.RandomSearch(1)_sample-size["100.0"]
weka.classifiers.meta.multisearch.RandomSearch(1)_num-folds["3"]
weka.classifiers.meta.multisearch.RandomSearch(1)_test-set["."]
weka.classifiers.meta.multisearch.RandomSearch(1)_num-iterations["50"]
weka.classifiers.meta.multisearch.RandomSearch(1)_num-slots["1"]
weka.classifiers.meta.multisearch.RandomSearch(1)_D["false"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic))(1)_F["weka.filters.MultiFilter"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic))(1)_doNotCheckForModifiedClassAttribute["false"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic))(1)_S["1"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic))(1)_W["weka.classifiers.functions.SMO"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic))(1)_output-debug-info["false"]
weka.classifiers.meta.FilteredClassifier(weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize),weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic))(1)_-do-not-check-capabilities["false"]
weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize)(1)_F["weka.filters.unsupervised.attribute.ReplaceMissingValues","weka.filters.unsupervised.attribute.RemoveUseless","weka.filters.unsupervised.attribute.Normalize"]
weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize)(1)_output-debug-info["false"]
weka.filters.MultiFilter(weka.filters.unsupervised.attribute.ReplaceMissingValues,weka.filters.unsupervised.attribute.RemoveUseless,weka.filters.unsupervised.attribute.Normalize)(1)_-do-not-check-capabilities["false"]
weka.filters.unsupervised.attribute.RemoveUseless(1)_M["99.0"]
weka.filters.unsupervised.attribute.Normalize(1)_S["1.0"]
weka.filters.unsupervised.attribute.Normalize(1)_T["0.0"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_no-checks["false"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_C["1.0"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_N["0"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_L["0.001"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_P["1.0E-12"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_M["false"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_V["-1"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_W["1"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_K["weka.classifiers.functions.supportVector.RBFKernel"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_calibrator["weka.classifiers.functions.Logistic"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_output-debug-info["false"]
weka.classifiers.functions.SMO(weka.classifiers.functions.supportVector.RBFKernel,weka.classifiers.functions.Logistic)(1)_-do-not-check-capabilities["false"]
weka.classifiers.functions.supportVector.RBFKernel(1)_C["250007"]
weka.classifiers.functions.supportVector.RBFKernel(1)_G["0.01"]
weka.classifiers.functions.supportVector.RBFKernel(1)_output-debug-info["false"]
weka.classifiers.functions.Logistic(1)_C["false"]
weka.classifiers.functions.Logistic(1)_R["1.0E-8"]
weka.classifiers.functions.Logistic(1)_M["-1"]
weka.classifiers.functions.Logistic(1)_output-debug-info["false"]
weka.classifiers.functions.Logistic(1)_-do-not-check-capabilities["false"]
weka.classifiers.functions.Logistic(1)_num-decimal-places["4"]

Result files

xml
Description

XML file describing the run, including user-defined evaluation measures.

arff
Predictions

ARFF file with instance-level predictions generated by the model.

arff
Trace

ARFF file with the trace of all hyperparameter settings tried during optimization, and their performance.

18 Evaluation measures

Area under ROC curve
0.8461 ± 0.0514
Per class
Cross-validation details (10-fold Crossvalidation)
F measure
0.8657 ± 0.0423
Per class
Cross-validation details (10-fold Crossvalidation)
Kappa
0.6984 ± 0.0959
Cross-validation details (10-fold Crossvalidation)
KB relative information score
0.6869 ± 0.0973
Cross-validation details (10-fold Crossvalidation)
Mean absolute error
0.1336 ± 0.0416
Cross-validation details (10-fold Crossvalidation)
Mean prior absolute error
0.4472 ± 0.0012
Cross-validation details (10-fold Crossvalidation)
Number of instances
1055
Per class
Cross-validation details (10-fold Crossvalidation)
OS information
['Oracle Corporation', '1.8.0_222', 'amd64', 'Linux', '3.10.0-1062.1.1.el7.x86_64']
Precision
0.8654 ± 0.0427
Per class
Cross-validation details (10-fold Crossvalidation)
Predictive accuracy
0.8664 ± 0.0416
Cross-validation details (10-fold Crossvalidation)
Prior entropy
0.9223 ± 0.0036
Cross-validation details (10-fold Crossvalidation)
Recall
0.8664 ± 0.0416
Per class
Cross-validation details (10-fold Crossvalidation)
Relative absolute error
0.2988 ± 0.0929
Cross-validation details (10-fold Crossvalidation)
Root mean prior squared error
0.4728 ± 0.0013
Cross-validation details (10-fold Crossvalidation)
Root mean squared error
0.3656 ± 0.0577
Cross-validation details (10-fold Crossvalidation)
Root relative squared error
0.7732 ± 0.1217
Cross-validation details (10-fold Crossvalidation)