Data
Cancer_Drug_Response_copynumber

Cancer_Drug_Response_copynumber

active ARFF CC BY-NC-ND 4.0 Visibility: public Uploaded 06-06-2024 by Jiahui Yu
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The dataset is obtained from Qiao Liu et al. (3).

711 features

Methotrexate_GDSC_1008 (target)numeric475 unique values
0 missing
AKT3numeric470 unique values
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FASnumeric465 unique values
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CRTC3numeric470 unique values
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ABI1numeric473 unique values
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IKBKBnumeric470 unique values
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STILnumeric467 unique values
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SH2B3numeric468 unique values
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IL2numeric466 unique values
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CDH10numeric472 unique values
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IL7Rnumeric469 unique values
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SKInumeric468 unique values
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EIF3Enumeric474 unique values
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CDH17numeric470 unique values
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IRF4numeric468 unique values
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BMP5numeric461 unique values
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LHFPnumeric472 unique values
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ARnumeric466 unique values
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RGPD3numeric463 unique values
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CDK4numeric468 unique values
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ITGAVnumeric469 unique values
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BMPR1Anumeric471 unique values
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ARAFnumeric469 unique values
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ITKnumeric469 unique values
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SMARCB1numeric470 unique values
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SMOnumeric465 unique values
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CDKN2Anumeric473 unique values
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SRCnumeric467 unique values
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CEBPAnumeric467 unique values
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CIITAnumeric466 unique values
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CLTCnumeric467 unique values
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CCR4numeric471 unique values
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TPRnumeric468 unique values
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AFF1numeric469 unique values
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CANT1numeric472 unique values
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TSHRnumeric469 unique values
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KDM6Anumeric471 unique values
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MTCP1numeric467 unique values
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WRNnumeric472 unique values
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VTI1Anumeric459 unique values
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CSF1Rnumeric469 unique values
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XPAnumeric462 unique values
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MUTYHnumeric467 unique values
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XPCnumeric469 unique values
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C15orf65numeric467 unique values
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MYBnumeric470 unique values
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MYCnumeric473 unique values
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YWHAEnumeric472 unique values
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MYCLnumeric467 unique values
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CTNND1numeric471 unique values
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MYCNnumeric464 unique values
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MYD88numeric468 unique values
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CACNA1Dnumeric466 unique values
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MB21D2numeric469 unique values
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CUX1numeric467 unique values
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PAX8numeric463 unique values
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CYLDnumeric469 unique values
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CXCR4numeric462 unique values
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MYO5Anumeric468 unique values
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ASPSCR1numeric472 unique values
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DAXXnumeric471 unique values
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MYOD1numeric465 unique values
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DCCnumeric474 unique values
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ATF1numeric462 unique values
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CHCHD7numeric467 unique values
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DCTN1numeric471 unique values
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DDB2numeric468 unique values
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NACAnumeric469 unique values
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CDC73numeric471 unique values
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NBNnumeric468 unique values
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ATICnumeric466 unique values
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TBL1XR1numeric471 unique values
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ATMnumeric471 unique values
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PALB2numeric469 unique values
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DDX6numeric473 unique values
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ATP1A1numeric469 unique values
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KAT6Anumeric469 unique values
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NF1numeric467 unique values
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CNBD1numeric470 unique values
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NFATC2numeric466 unique values
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FBXO11numeric471 unique values
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NFIBnumeric471 unique values
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PREX2numeric475 unique values
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DNMT3Anumeric464 unique values
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NFKB2numeric463 unique values
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MLLT10numeric473 unique values
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EBF1numeric472 unique values
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NFKBIEnumeric470 unique values
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CCDC6numeric465 unique values
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EGFRnumeric471 unique values
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NONOnumeric463 unique values
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C2orf44numeric466 unique values
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EIF1AXnumeric469 unique values
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CNOT3numeric469 unique values
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NCOA4numeric464 unique values
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ARID2numeric465 unique values
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NOTCH1numeric466 unique values
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TET1numeric467 unique values
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EIF4A2numeric469 unique values
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PDCD1LG2numeric473 unique values
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ELF3numeric463 unique values
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NPM1numeric470 unique values
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NRASnumeric468 unique values
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FLCNnumeric469 unique values
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TAF15numeric468 unique values
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EP300numeric468 unique values
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DDR2numeric467 unique values
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ELLnumeric468 unique values
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EPHA3numeric472 unique values
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CLTCL1numeric470 unique values
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EPS15numeric466 unique values
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OMDnumeric462 unique values
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ERBB2numeric472 unique values
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PAFAH1B2numeric470 unique values
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ERBB3numeric463 unique values
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CHST11numeric470 unique values
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ERBB4numeric466 unique values
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SMC1Anumeric466 unique values
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ERCC2numeric470 unique values
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PAX3numeric465 unique values
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ARID1Anumeric466 unique values
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AKT1numeric469 unique values
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ERCC3numeric460 unique values
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PAX7numeric467 unique values
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TRRAPnumeric470 unique values
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ERCC4numeric467 unique values
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PCM1numeric469 unique values
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HIST1H3Bnumeric469 unique values
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EWSR1numeric470 unique values
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SPOPnumeric467 unique values
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USP44numeric462 unique values
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PRCCnumeric469 unique values
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LATS1numeric468 unique values
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DICER1numeric468 unique values
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RABEP1numeric469 unique values
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SF3B1numeric467 unique values
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PRF1numeric468 unique values
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HEY1numeric470 unique values
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BRD4numeric468 unique values
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LEPROTL1numeric471 unique values
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ZMYM3numeric463 unique values
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SUZ12numeric467 unique values
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N4BP2numeric472 unique values
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SPECC1numeric469 unique values
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CBLCnumeric469 unique values
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ALKnumeric465 unique values
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MTORnumeric469 unique values
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MAP2K1numeric469 unique values
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ABL1numeric469 unique values
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B2Mnumeric466 unique values
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NCOR1numeric470 unique values
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HERPUD1numeric470 unique values
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ARID1Bnumeric470 unique values
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CNTNAP2numeric474 unique values
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MKL1numeric469 unique values
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BCLAF1numeric470 unique values
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GATA1numeric469 unique values
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KIAA1549numeric467 unique values
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KEAP1numeric468 unique values
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GATA2numeric469 unique values
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SETDB1numeric470 unique values
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SRGAP3numeric471 unique values
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CHIC2numeric470 unique values
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PTPN6numeric470 unique values
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MAFBnumeric467 unique values
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LATS2numeric471 unique values
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GOLGA5numeric468 unique values
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CCNB1IP1numeric471 unique values
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THRAP3numeric469 unique values
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PABPC1numeric473 unique values
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MED12numeric463 unique values
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ABL2numeric468 unique values
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PTPRBnumeric465 unique values
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CDH1numeric474 unique values
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SND1numeric472 unique values
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FOXP1numeric468 unique values
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AFF4numeric462 unique values
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GPC3numeric465 unique values
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BARD1numeric466 unique values
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GLI1numeric468 unique values
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KMT2Cnumeric473 unique values
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GNA11numeric471 unique values
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RAC1numeric467 unique values
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GNAQnumeric467 unique values
0 missing
RAD17numeric469 unique values
0 missing
GNASnumeric467 unique values
0 missing
RAD21numeric470 unique values
0 missing
BCL9Lnumeric470 unique values
0 missing
RAD51Bnumeric471 unique values
0 missing
FOXR1numeric470 unique values
0 missing
RAF1numeric469 unique values
0 missing
HMGN2P46numeric466 unique values
0 missing
RALGDSnumeric465 unique values
0 missing
ANK1numeric469 unique values
0 missing
RANBP2numeric463 unique values
0 missing
P2RY8numeric343 unique values
126 missing
RAP1GDS1numeric471 unique values
0 missing
GRIN2Anumeric467 unique values
0 missing
RARAnumeric470 unique values
0 missing
SETD2numeric470 unique values
0 missing
RB1numeric473 unique values
0 missing
DROSHAnumeric470 unique values
0 missing
KDM5Anumeric469 unique values
0 missing
CD274numeric472 unique values
0 missing
CCND1numeric470 unique values
0 missing
GRM3numeric470 unique values
0 missing
BCL2numeric470 unique values
0 missing
MSH6numeric471 unique values
0 missing
RELnumeric463 unique values
0 missing
TFPTnumeric469 unique values
0 missing
RETnumeric465 unique values
0 missing
A1CFnumeric467 unique values
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TRIM27numeric467 unique values
0 missing
TLX3numeric470 unique values
0 missing
RGS7numeric469 unique values
0 missing
H3F3Anumeric470 unique values
0 missing
BCL3numeric469 unique values
0 missing
H3F3Bnumeric469 unique values
0 missing
BCL6numeric468 unique values
0 missing
CD209numeric468 unique values
0 missing
BCL7Anumeric466 unique values
0 missing
NRG1numeric472 unique values
0 missing
BCL9numeric469 unique values
0 missing
HIF1Anumeric474 unique values
0 missing
TNFRSF17numeric466 unique values
0 missing
HIP1numeric469 unique values
0 missing
ROBO2numeric470 unique values
0 missing
HLA-Anumeric469 unique values
0 missing
ROS1numeric470 unique values
0 missing
MNX1numeric468 unique values
0 missing
RPL5numeric464 unique values
0 missing
HLFnumeric465 unique values
0 missing
BCRnumeric466 unique values
0 missing
HMGA1numeric471 unique values
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RPL10numeric467 unique values
0 missing
FOXA1numeric471 unique values
0 missing
RPL22numeric466 unique values
0 missing
HNRNPA2B1numeric471 unique values
0 missing
RPN1numeric469 unique values
0 missing
TLX1numeric463 unique values
0 missing
CLIP1numeric464 unique values
0 missing
HOXA9numeric471 unique values
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S100A7numeric468 unique values
0 missing
HOXA11numeric471 unique values
0 missing
BCORL1numeric466 unique values
0 missing
HOXA13numeric471 unique values
0 missing
SDC4numeric467 unique values
0 missing
HOXC11numeric465 unique values
0 missing
SDHAnumeric472 unique values
0 missing
HOXC13numeric465 unique values
0 missing
PRDM1numeric464 unique values
0 missing
HOXD11numeric467 unique values
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SDHBnumeric468 unique values
0 missing
HOXD13numeric467 unique values
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SDHCnumeric469 unique values
0 missing
APCnumeric466 unique values
0 missing
SDHDnumeric472 unique values
0 missing
HRASnumeric466 unique values
0 missing
PRDM16numeric465 unique values
0 missing
BIRC3numeric474 unique values
0 missing
BLMnumeric471 unique values
0 missing
HSP90AA1numeric469 unique values
0 missing
CRLF2numeric343 unique values
126 missing
HSP90AB1numeric472 unique values
0 missing
MAP2K4numeric469 unique values
0 missing
DNAJB1numeric465 unique values
0 missing
SETnumeric470 unique values
0 missing
TNCnumeric469 unique values
0 missing
SFPQnumeric468 unique values
0 missing
ID3numeric469 unique values
0 missing
SFRP4numeric470 unique values
0 missing
RSPO2numeric474 unique values
0 missing
SRSF2numeric467 unique values
0 missing
DCAF12L2numeric468 unique values
0 missing
SRSF3numeric470 unique values
0 missing
IDH1numeric467 unique values
0 missing
NSD1numeric470 unique values
0 missing
IDH2numeric470 unique values
0 missing
SGK1numeric470 unique values
0 missing
ECT2Lnumeric474 unique values
0 missing
SH3GL1numeric468 unique values
0 missing
MACC1numeric474 unique values
0 missing
CREB3L2numeric466 unique values
0 missing
ZNF429numeric469 unique values
0 missing
RBM15numeric468 unique values
0 missing
Show first 100 features

19 properties

NumberOfInstances
475
Number of instances (rows) of the dataset.
NumberOfFeatures
711
Number of attributes (columns) of the dataset.
NumberOfClasses
0
Number of distinct values of the target attribute (if it is nominal).
NumberOfMissingValues
252
Number of missing values in the dataset.
NumberOfInstancesWithMissingValues
126
Number of instances with at least one value missing.
NumberOfNumericFeatures
711
Number of numeric attributes.
NumberOfSymbolicFeatures
0
Number of nominal attributes.
PercentageOfBinaryFeatures
0
Percentage of binary attributes.
PercentageOfInstancesWithMissingValues
26.53
Percentage of instances having missing values.
PercentageOfMissingValues
0.07
Percentage of missing values.
AutoCorrelation
-0.92
Average class difference between consecutive instances.
PercentageOfNumericFeatures
100
Percentage of numeric attributes.
Dimensionality
1.5
Number of attributes divided by the number of instances.
PercentageOfSymbolicFeatures
0
Percentage of nominal attributes.
MajorityClassPercentage
Percentage of instances belonging to the most frequent class.
MajorityClassSize
Number of instances belonging to the most frequent class.
MinorityClassPercentage
Percentage of instances belonging to the least frequent class.
MinorityClassSize
Number of instances belonging to the least frequent class.
NumberOfBinaryFeatures
0
Number of binary attributes.
Show all 19 properties

1 tasks

Supervised Regression on Cancer_Drug_Response_copynumber
0 runs - estimation_procedure: 10-fold Crossvalidation - evaluation_measure: root_mean_squared_error - target_feature: Methotrexate_GDSC_1008
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