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QSAR-DATASET-FOR-DRUG-TARGET-CHEMBL4718

QSAR-DATASET-FOR-DRUG-TARGET-CHEMBL4718

deactivated ARFF Publicly available Visibility: public Uploaded 15-07-2016 by Noureddin Sadawi
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This dataset contains QSAR data (from ChEMBL version 17) showing activity values (unit is pseudo-pCI50) of several compounds on drug target ChEMBL_ID: CHEMBL4718 (TID: 100835), and it has 125 rows and 43 features (not including molecule IDs and class feature: molecule_id and pXC50). The features represent Basic Molecular Descriptors which were generated from SMILES strings. Missing value imputation was applied to this dataset (By choosing the Median).

45 features

pXC50 (target)numeric60 unique values
0 missing
molecule_id (row identifier)nominal125 unique values
0 missing
AMWnumeric116 unique values
0 missing
C.numeric80 unique values
0 missing
H.numeric78 unique values
0 missing
Menumeric46 unique values
0 missing
Minumeric41 unique values
0 missing
Mpnumeric80 unique values
0 missing
Mvnumeric78 unique values
0 missing
MWnumeric119 unique values
0 missing
N.numeric69 unique values
0 missing
nABnumeric19 unique values
0 missing
nATnumeric48 unique values
0 missing
nBnumeric1 unique values
0 missing
nBMnumeric21 unique values
0 missing
nBOnumeric34 unique values
0 missing
nBRnumeric3 unique values
0 missing
nBTnumeric51 unique values
0 missing
nCnumeric25 unique values
0 missing
nCLnumeric3 unique values
0 missing
nCspnumeric3 unique values
0 missing
nCsp2numeric20 unique values
0 missing
nCsp3numeric16 unique values
0 missing
nDBnumeric6 unique values
0 missing
nFnumeric5 unique values
0 missing
nHnumeric32 unique values
0 missing
nHetnumeric10 unique values
0 missing
nHMnumeric4 unique values
0 missing
nInumeric2 unique values
0 missing
nNnumeric9 unique values
0 missing
nOnumeric7 unique values
0 missing
nPnumeric1 unique values
0 missing
nSnumeric3 unique values
0 missing
nSKnumeric32 unique values
0 missing
nTBnumeric2 unique values
0 missing
nXnumeric6 unique values
0 missing
O.numeric50 unique values
0 missing
RBFnumeric68 unique values
0 missing
RBNnumeric14 unique values
0 missing
SCBOnumeric58 unique values
0 missing
Senumeric119 unique values
0 missing
Sinumeric119 unique values
0 missing
Spnumeric118 unique values
0 missing
Svnumeric119 unique values
0 missing
X.numeric38 unique values
0 missing

62 properties

125
Number of instances (rows) of the dataset.
45
Number of attributes (columns) of the dataset.
0
Number of distinct values of the target attribute (if it is nominal).
0
Number of missing values in the dataset.
0
Number of instances with at least one value missing.
44
Number of numeric attributes.
1
Number of nominal attributes.
0.18
Second quartile (Median) of kurtosis among attributes of the numeric type.
0.36
Number of attributes divided by the number of instances.
Average number of distinct values among the attributes of the nominal type.
5.04
Second quartile (Median) of means among attributes of the numeric type.
Number of attributes needed to optimally describe the class (under the assumption of independence among attributes). Equals ClassEntropy divided by MeanMutualInformation.
1.16
Mean skewness among attributes of the numeric type.
Second quartile (Median) of mutual information between the nominal attributes and the target attribute.
Percentage of instances belonging to the most frequent class.
6.27
Mean standard deviation of attributes of the numeric type.
0.46
Second quartile (Median) of skewness among attributes of the numeric type.
Number of instances belonging to the most frequent class.
Minimal entropy among attributes.
0
Percentage of binary attributes.
2.31
Second quartile (Median) of standard deviation of attributes of the numeric type.
Maximum entropy among attributes.
-0.78
Minimum kurtosis among attributes of the numeric type.
0
Minimum of means among attributes of the numeric type.
0
Percentage of instances having missing values.
Third quartile of entropy among attributes.
125
Maximum kurtosis among attributes of the numeric type.
Minimal mutual information between the nominal attributes and the target attribute.
0
Percentage of missing values.
1.66
Third quartile of kurtosis among attributes of the numeric type.
400.47
Maximum of means among attributes of the numeric type.
The minimal number of distinct values among attributes of the nominal type.
97.78
Percentage of numeric attributes.
30.9
Third quartile of means among attributes of the numeric type.
Maximum mutual information between the nominal attributes and the target attribute.
-0.43
Minimum skewness among attributes of the numeric type.
2.22
Percentage of nominal attributes.
Third quartile of mutual information between the nominal attributes and the target attribute.
The maximum number of distinct values among attributes of the nominal type.
0
Minimum standard deviation of attributes of the numeric type.
First quartile of entropy among attributes.
1.43
Third quartile of skewness among attributes of the numeric type.
11.18
Maximum skewness among attributes of the numeric type.
Percentage of instances belonging to the least frequent class.
-0.59
First quartile of kurtosis among attributes of the numeric type.
6.99
Third quartile of standard deviation of attributes of the numeric type.
104.06
Maximum standard deviation of attributes of the numeric type.
Number of instances belonging to the least frequent class.
0.59
First quartile of means among attributes of the numeric type.
Standard deviation of the number of distinct values among attributes of the nominal type.
Average entropy of the attributes.
0
Number of binary attributes.
First quartile of mutual information between the nominal attributes and the target attribute.
4.92
Mean kurtosis among attributes of the numeric type.
0.23
First quartile of skewness among attributes of the numeric type.
23.06
Mean of means among attributes of the numeric type.
0.36
First quartile of standard deviation of attributes of the numeric type.
0.37
Average class difference between consecutive instances.
Average mutual information between the nominal attributes and the target attribute.
Second quartile (Median) of entropy among attributes.
Entropy of the target attribute values.
An estimate of the amount of irrelevant information in the attributes regarding the class. Equals (MeanAttributeEntropy - MeanMutualInformation) divided by MeanMutualInformation.

12 tasks

1 runs - estimation_procedure: Custom 10-fold Crossvalidation - target_feature: pXC50
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
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