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QSAR-DATASET-FOR-DRUG-TARGET-CHEMBL6002

QSAR-DATASET-FOR-DRUG-TARGET-CHEMBL6002

deactivated ARFF Publicly available Visibility: public Uploaded 15-07-2016 by Noureddin Sadawi
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This dataset contains QSAR data (from ChEMBL version 17) showing activity values (unit is pseudo-pCI50) of several compounds on drug target ChEMBL_ID: CHEMBL6002 (TID: 101407), and it has 276 rows and 43 features (not including molecule IDs and class feature: molecule_id and pXC50). The features represent Basic Molecular Descriptors which were generated from SMILES strings. Missing value imputation was applied to this dataset (By choosing the Median).

45 features

pXC50 (target)numeric36 unique values
0 missing
molecule_id (row identifier)nominal276 unique values
0 missing
AMWnumeric237 unique values
0 missing
C.numeric109 unique values
0 missing
H.numeric118 unique values
0 missing
Menumeric60 unique values
0 missing
Minumeric54 unique values
0 missing
Mpnumeric108 unique values
0 missing
Mvnumeric117 unique values
0 missing
MWnumeric259 unique values
0 missing
N.numeric102 unique values
0 missing
nABnumeric23 unique values
0 missing
nATnumeric61 unique values
0 missing
nBnumeric1 unique values
0 missing
nBMnumeric27 unique values
0 missing
nBOnumeric40 unique values
0 missing
nBRnumeric2 unique values
0 missing
nBTnumeric64 unique values
0 missing
nCnumeric30 unique values
0 missing
nCLnumeric4 unique values
0 missing
nCspnumeric3 unique values
0 missing
nCsp2numeric25 unique values
0 missing
nCsp3numeric16 unique values
0 missing
nDBnumeric6 unique values
0 missing
nFnumeric6 unique values
0 missing
nHnumeric36 unique values
0 missing
nHetnumeric12 unique values
0 missing
nHMnumeric4 unique values
0 missing
nInumeric2 unique values
0 missing
nNnumeric9 unique values
0 missing
nOnumeric7 unique values
0 missing
nPnumeric1 unique values
0 missing
nSnumeric3 unique values
0 missing
nSKnumeric34 unique values
0 missing
nTBnumeric2 unique values
0 missing
nXnumeric6 unique values
0 missing
O.numeric79 unique values
0 missing
RBFnumeric106 unique values
0 missing
RBNnumeric14 unique values
0 missing
SCBOnumeric84 unique values
0 missing
Senumeric256 unique values
0 missing
Sinumeric260 unique values
0 missing
Spnumeric256 unique values
0 missing
Svnumeric259 unique values
0 missing
X.numeric55 unique values
0 missing

62 properties

276
Number of instances (rows) of the dataset.
45
Number of attributes (columns) of the dataset.
0
Number of distinct values of the target attribute (if it is nominal).
0
Number of missing values in the dataset.
0
Number of instances with at least one value missing.
44
Number of numeric attributes.
1
Number of nominal attributes.
0
Percentage of binary attributes.
2.46
Second quartile (Median) of standard deviation of attributes of the numeric type.
Maximum entropy among attributes.
-0.62
Minimum kurtosis among attributes of the numeric type.
0
Percentage of instances having missing values.
Third quartile of entropy among attributes.
276
Maximum kurtosis among attributes of the numeric type.
0
Minimum of means among attributes of the numeric type.
0
Percentage of missing values.
2.52
Third quartile of kurtosis among attributes of the numeric type.
385.12
Maximum of means among attributes of the numeric type.
Minimal mutual information between the nominal attributes and the target attribute.
97.78
Percentage of numeric attributes.
29.71
Third quartile of means among attributes of the numeric type.
Maximum mutual information between the nominal attributes and the target attribute.
The minimal number of distinct values among attributes of the nominal type.
2.22
Percentage of nominal attributes.
Third quartile of mutual information between the nominal attributes and the target attribute.
The maximum number of distinct values among attributes of the nominal type.
-0.31
Minimum skewness among attributes of the numeric type.
First quartile of entropy among attributes.
1.35
Third quartile of skewness among attributes of the numeric type.
16.61
Maximum skewness among attributes of the numeric type.
0
Minimum standard deviation of attributes of the numeric type.
-0.29
First quartile of kurtosis among attributes of the numeric type.
6.85
Third quartile of standard deviation of attributes of the numeric type.
104.05
Maximum standard deviation of attributes of the numeric type.
Percentage of instances belonging to the least frequent class.
0.64
First quartile of means among attributes of the numeric type.
Standard deviation of the number of distinct values among attributes of the nominal type.
Average entropy of the attributes.
Number of instances belonging to the least frequent class.
First quartile of mutual information between the nominal attributes and the target attribute.
8.26
Mean kurtosis among attributes of the numeric type.
0
Number of binary attributes.
0.29
First quartile of skewness among attributes of the numeric type.
22.18
Mean of means among attributes of the numeric type.
0.34
First quartile of standard deviation of attributes of the numeric type.
0.3
Average class difference between consecutive instances.
Average mutual information between the nominal attributes and the target attribute.
Second quartile (Median) of entropy among attributes.
Entropy of the target attribute values.
An estimate of the amount of irrelevant information in the attributes regarding the class. Equals (MeanAttributeEntropy - MeanMutualInformation) divided by MeanMutualInformation.
0.24
Second quartile (Median) of kurtosis among attributes of the numeric type.
0.16
Number of attributes divided by the number of instances.
Average number of distinct values among the attributes of the nominal type.
4.37
Second quartile (Median) of means among attributes of the numeric type.
Number of attributes needed to optimally describe the class (under the assumption of independence among attributes). Equals ClassEntropy divided by MeanMutualInformation.
1.28
Mean skewness among attributes of the numeric type.
Second quartile (Median) of mutual information between the nominal attributes and the target attribute.
Percentage of instances belonging to the most frequent class.
6.21
Mean standard deviation of attributes of the numeric type.
0.52
Second quartile (Median) of skewness among attributes of the numeric type.
Number of instances belonging to the most frequent class.
Minimal entropy among attributes.

12 tasks

1 runs - estimation_procedure: Custom 10-fold Crossvalidation - target_feature: pXC50
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
0 runs - estimation_procedure: 50 times Clustering
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